Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AC105020.1-201ENST00000435356 2205 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 AL138709.1-201ENST00000614840 1693 ntBASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNTNAP3Q9BZ76 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 AP002803.1-201ENST00000528836 498 ntBASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 AC103988.2-201ENST00000561804 725 ntBASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 DNM1P30-201ENST00000563586 452 ntBASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 AL132780.4-201ENST00000624870 1135 ntBASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 AC106886.4-201ENST00000623557 2502 ntBASIC14.8□□□□□ -0.04
CNTNAP3Q9BZ76 PCDH8P1-201ENST00000428983 2773 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 LYSMD4-203ENST00000378904 2122 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AL353637.1-201ENST00000451571 732 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 IGHEP1-201ENST00000521393 651 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms