Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 RPL13AP20-201ENST00000459725 609 ntBASIC16.16■□□□□ 0.18
LRRC3Q9BY71 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 KRT18P25-201ENST00000508931 1278 ntBASIC16.16■□□□□ 0.18
LRRC3Q9BY71 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 MIR6787-201ENST00000616675 61 ntBASIC16.16■□□□□ 0.18
LRRC3Q9BY71 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 PRSS30P-206ENST00000641773 873 ntBASIC16.16■□□□□ 0.18
LRRC3Q9BY71 FER1L4-210ENST00000615531 5998 ntBASIC16.16■□□□□ 0.18
LRRC3Q9BY71 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRRC3Q9BY71 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 RNU1-114P-201ENST00000365297 166 ntBASIC16.15■□□□□ 0.18
LRRC3Q9BY71 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 BRWD1P1-201ENST00000401091 371 ntBASIC16.15■□□□□ 0.18
LRRC3Q9BY71 ACTBP8-201ENST00000403258 1108 ntBASIC16.15■□□□□ 0.18
LRRC3Q9BY71 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRC3Q9BY71 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRC3Q9BY71 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC3Q9BY71 KLF2P2-201ENST00000416807 1039 ntBASIC16.14■□□□□ 0.17
LRRC3Q9BY71 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms