Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS2Q99743 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS2Q99743 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.32■□□□□ 0.04
NPAS2Q99743 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.32■□□□□ 0.04
NPAS2Q99743 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS2Q99743 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.32■□□□□ 0.04
NPAS2Q99743 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
NPAS2Q99743 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
NPAS2Q99743 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS2Q99743 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC142381.1-201ENST00000426099 345 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 KRT18P34-201ENST00000488218 1270 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC069262.1-201ENST00000539058 672 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS2Q99743 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS2Q99743 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC005498.2-205ENST00000593218 784 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 AL390955.2-201ENST00000603032 514 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.31■□□□□ 0.04
NPAS2Q99743 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 FOXO1B-201ENST00000504678 1527 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 AC126365.1-201ENST00000578585 1514 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 AC073439.1-201ENST00000624121 1774 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 AC127383.1-201ENST00000444697 1800 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.31■□□□□ 0.04
NPAS2Q99743 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NPAS2Q99743 OR2I1P-210ENST00000642037 4691 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
NPAS2Q99743 FGD5P1-202ENST00000614866 2498 ntBASIC15.31■□□□□ 0.04
NPAS2Q99743 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS2Q99743 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS2Q99743 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS2Q99743 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS2Q99743 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.3■□□□□ 0.04
NPAS2Q99743 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS2Q99743 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.3■□□□□ 0.04
NPAS2Q99743 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.3■□□□□ 0.04
NPAS2Q99743 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NPAS2Q99743 DUX4L27-201ENST00000554796 1261 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms