Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RFPL4AP1-201ENST00000530883 850 ntBASIC14.78□□□□□ -0.04
COL21A1Q96P44 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AL079307.3-201ENST00000556114 283 ntBASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC023908.3-201ENST00000564211 3047 ntBASIC14.78□□□□□ -0.04
COL21A1Q96P44 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
COL21A1Q96P44 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.78□□□□□ -0.04
COL21A1Q96P44 C18orf15-201ENST00000623680 2534 ntBASIC14.77□□□□□ -0.04
COL21A1Q96P44 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.77□□□□□ -0.04
COL21A1Q96P44 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
COL21A1Q96P44 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.77□□□□□ -0.04
COL21A1Q96P44 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
COL21A1Q96P44 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
COL21A1Q96P44 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.77□□□□□ -0.04
COL21A1Q96P44 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.77□□□□□ -0.04
COL21A1Q96P44 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 MIR943-201ENST00000401286 94 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 SPDYE17-201ENST00000412399 783 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 HLA-V-204ENST00000476601 1289 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 DUX4L27-201ENST00000554796 1261 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 AL450472.2-201ENST00000603663 1156 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 AL158211.3-201ENST00000607385 239 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC093512.1-201ENST00000617969 520 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC073592.8-201ENST00000624126 511 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 SNX18-202ENST00000343017 3140 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 AC106881.1-201ENST00000605849 3329 ntBASIC14.77□□□□□ -0.05
COL21A1Q96P44 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
COL21A1Q96P44 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
COL21A1Q96P44 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC112693.3-201ENST00000624819 1983 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 KRT8P37-201ENST00000451609 1420 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC026748.1-201ENST00000624349 3251 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 OR2I1P-210ENST00000642037 4691 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 FO538757.1-201ENST00000623083 1397 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 AC127383.1-201ENST00000444697 1800 ntBASIC14.76□□□□□ -0.05
COL21A1Q96P44 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
COL21A1Q96P44 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
COL21A1Q96P44 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms