Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FGD4Q96M96 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 AHCYP2-201ENST00000430630 1300 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FGD4Q96M96 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.53■□□□□ 0.4
FGD4Q96M96 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 MIR1202-201ENST00000408529 83 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.53■□□□□ 0.4
FGD4Q96M96 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.53■□□□□ 0.4
FGD4Q96M96 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 RNA5SP486-201ENST00000515961 83 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.53■□□□□ 0.4
FGD4Q96M96 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.53■□□□□ 0.4
FGD4Q96M96 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.53■□□□□ 0.4
FGD4Q96M96 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 ECM1P1-201ENST00000604092 1279 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 AL118558.3-201ENST00000607414 1079 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 AC005695.3-201ENST00000614522 232 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.53■□□□□ 0.4
FGD4Q96M96 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 AC006453.4-201ENST00000636949 1252 ntBASIC17.53■□□□□ 0.4
FGD4Q96M96 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.53■□□□□ 0.4
FGD4Q96M96 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
FGD4Q96M96 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.53■□□□□ 0.4
FGD4Q96M96 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FGD4Q96M96 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FGD4Q96M96 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FGD4Q96M96 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 AC245100.3-201ENST00000441281 285 ntBASIC17.52■□□□□ 0.4
FGD4Q96M96 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.52■□□□□ 0.4
FGD4Q96M96 AL591846.1-201ENST00000451736 433 ntBASIC17.52■□□□□ 0.4
FGD4Q96M96 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.52■□□□□ 0.4
FGD4Q96M96 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.52■□□□□ 0.4
FGD4Q96M96 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.52■□□□□ 0.4
FGD4Q96M96 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FGD4Q96M96 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.52■□□□□ 0.4
FGD4Q96M96 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.52■□□□□ 0.4
FGD4Q96M96 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
FGD4Q96M96 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.52■□□□□ 0.39
FGD4Q96M96 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
FGD4Q96M96 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
FGD4Q96M96 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
FGD4Q96M96 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
FGD4Q96M96 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FGD4Q96M96 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms