Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX27Q96L92 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 KRT43P-201ENST00000434019 910 ntBASIC16.72■□□□□ 0.27
SNX27Q96L92 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX27Q96L92 AC106760.1-201ENST00000508690 800 ntBASIC16.72■□□□□ 0.27
SNX27Q96L92 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.72■□□□□ 0.27
SNX27Q96L92 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SNX27Q96L92 AL022328.1-201ENST00000610050 478 ntBASIC16.72■□□□□ 0.27
SNX27Q96L92 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX27Q96L92 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX27Q96L92 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SNX27Q96L92 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 AC134312.5-201ENST00000568031 1313 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 CROCCP1-201ENST00000426910 5675 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.71■□□□□ 0.27
SNX27Q96L92 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.71■□□□□ 0.27
SNX27Q96L92 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SNX27Q96L92 AC090616.6-203ENST00000579186 1945 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 RPL5P21-201ENST00000404620 815 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX27Q96L92 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 AL355864.2-201ENST00000447420 863 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 BCRP2-202ENST00000447763 634 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.71■□□□□ 0.27
SNX27Q96L92 BCRP6-201ENST00000510112 632 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 BCRP7-201ENST00000511549 544 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX27Q96L92 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.71■□□□□ 0.27
SNX27Q96L92 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 SNX29P1-201ENST00000548357 1007 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.71■□□□□ 0.27
SNX27Q96L92 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 BX539320.1-201ENST00000623759 877 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 AC015967.2-201ENST00000624092 234 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 AC006435.4-201ENST00000625037 234 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 AL356737.1-201ENST00000634391 234 ntBASIC16.71■□□□□ 0.27
SNX27Q96L92 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SNX27Q96L92 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.71■□□□□ 0.27
SNX27Q96L92 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SNX27Q96L92 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNX27Q96L92 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SNX27Q96L92 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SNX27Q96L92 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SNX27Q96L92 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SNX27Q96L92 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX27Q96L92 BOLA2P3-201ENST00000404566 256 ntBASIC16.7■□□□□ 0.26
SNX27Q96L92 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.7■□□□□ 0.26
SNX27Q96L92 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.7■□□□□ 0.26
SNX27Q96L92 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.7■□□□□ 0.26
SNX27Q96L92 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SNX27Q96L92 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX27Q96L92 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX27Q96L92 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms