Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PDLIM5Q96HC4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 REXO1L2P-201ENST00000425429 2069 ntBASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 AP000845.1-201ENST00000581677 2131 ntBASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 AC022144.1-201ENST00000602255 1580 ntBASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 LINC00528-201ENST00000600723 2160 ntBASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PDLIM5Q96HC4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 AL158212.4-201ENST00000624062 1286 ntBASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PDLIM5Q96HC4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.16■□□□□ 0.02
PDLIM5Q96HC4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms