Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX11Q96FC9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX11Q96FC9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 RN7SL752P-201ENST00000463779 287 ntBASIC18.52■□□□□ 0.56
DDX11Q96FC9 SPDYE18-201ENST00000510091 1050 ntBASIC18.52■□□□□ 0.56
DDX11Q96FC9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 SRD5A3P1-201ENST00000603021 949 ntBASIC18.52■□□□□ 0.56
DDX11Q96FC9 AC008494.3-201ENST00000606615 944 ntBASIC18.52■□□□□ 0.56
DDX11Q96FC9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX11Q96FC9 AC068418.2-201ENST00000577309 3703 ntBASIC18.52■□□□□ 0.55
DDX11Q96FC9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.52■□□□□ 0.55
DDX11Q96FC9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.52■□□□□ 0.55
DDX11Q96FC9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
DDX11Q96FC9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX11Q96FC9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
DDX11Q96FC9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
DDX11Q96FC9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AC127383.1-201ENST00000444697 1800 ntBASIC18.51■□□□□ 0.55
DDX11Q96FC9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AC004790.1-201ENST00000612686 536 ntBASIC18.51■□□□□ 0.55
DDX11Q96FC9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 AC004461.2-201ENST00000629517 803 ntBASIC18.51■□□□□ 0.55
DDX11Q96FC9 AL109936.8-201ENST00000641772 604 ntBASIC18.51■□□□□ 0.55
DDX11Q96FC9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 FLJ16779-201ENST00000612722 7638 ntBASIC18.51■□□□□ 0.55
DDX11Q96FC9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
DDX11Q96FC9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DDX11Q96FC9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 INE1-201ENST00000456273 945 ntBASIC18.5■□□□□ 0.55
DDX11Q96FC9 AC011495.1-201ENST00000498085 584 ntBASIC18.5■□□□□ 0.55
DDX11Q96FC9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 TPRX2P-201ENST00000535362 881 ntBASIC18.5■□□□□ 0.55
DDX11Q96FC9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 AC007431.3-201ENST00000623221 587 ntBASIC18.5■□□□□ 0.55
DDX11Q96FC9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 SLC7A15P-201ENST00000424028 1363 ntBASIC18.5■□□□□ 0.55
DDX11Q96FC9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
DDX11Q96FC9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX11Q96FC9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms