Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 HYMAI-201ENST00000635591 3347 ntBASIC16.84■□□□□ 0.29
PGBD4Q96DM1 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.84■□□□□ 0.29
PGBD4Q96DM1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 CSF2RBP1-201ENST00000447905 391 ntBASIC16.84■□□□□ 0.29
PGBD4Q96DM1 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 AC092658.1-201ENST00000505836 891 ntBASIC16.84■□□□□ 0.29
PGBD4Q96DM1 AC106760.1-201ENST00000508690 800 ntBASIC16.84■□□□□ 0.29
PGBD4Q96DM1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 BX539320.1-201ENST00000623759 877 ntBASIC16.84■□□□□ 0.29
PGBD4Q96DM1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PGBD4Q96DM1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PGBD4Q96DM1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PGBD4Q96DM1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
PGBD4Q96DM1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
PGBD4Q96DM1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 AC099336.1-201ENST00000417053 1171 ntBASIC16.83■□□□□ 0.28
PGBD4Q96DM1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 FAM21FP-201ENST00000426241 1131 ntBASIC16.83■□□□□ 0.28
PGBD4Q96DM1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 RNA5SP412-201ENST00000516234 123 ntBASIC16.83■□□□□ 0.28
PGBD4Q96DM1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PGBD4Q96DM1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
PGBD4Q96DM1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 REXO1L6P-201ENST00000603433 1515 ntBASIC16.81■□□□□ 0.28
PGBD4Q96DM1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.81■□□□□ 0.28
PGBD4Q96DM1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms