Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPGRQ92834 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.99■□□□□ 0.63
RPGRQ92834 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPGRQ92834 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RPGRQ92834 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPGRQ92834 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.98■□□□□ 0.63
RPGRQ92834 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 MIR769-201ENST00000390225 118 ntBASIC18.98■□□□□ 0.63
RPGRQ92834 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 AC016700.1-201ENST00000429424 312 ntBASIC18.98■□□□□ 0.63
RPGRQ92834 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.98■□□□□ 0.63
RPGRQ92834 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 AC022616.1-201ENST00000518688 554 ntBASIC18.98■□□□□ 0.63
RPGRQ92834 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.98■□□□□ 0.63
RPGRQ92834 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.98■□□□□ 0.63
RPGRQ92834 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.98■□□□□ 0.63
RPGRQ92834 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RPGRQ92834 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.98■□□□□ 0.63
RPGRQ92834 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPGRQ92834 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.97■□□□□ 0.63
RPGRQ92834 PCDHA12-202ENST00000613593 2588 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RPGRQ92834 CYP46A4P-201ENST00000414953 267 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 POM121L8P-201ENST00000417732 1281 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 POM121L9P-203ENST00000441984 1285 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.97■□□□□ 0.63
RPGRQ92834 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC18.97■□□□□ 0.63
RPGRQ92834 AL391280.1-201ENST00000506969 1062 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18.97■□□□□ 0.63
RPGRQ92834 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RPGRQ92834 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RPGRQ92834 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
RPGRQ92834 AC084364.1-201ENST00000551967 1556 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.97■□□□□ 0.63
RPGRQ92834 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RPGRQ92834 LINC02447-202ENST00000501888 2146 ntBASIC18.97■□□□□ 0.63
RPGRQ92834 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RPGRQ92834 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RPGRQ92834 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPGRQ92834 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.96■□□□□ 0.63
RPGRQ92834 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPGRQ92834 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPGRQ92834 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RPGRQ92834 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RPGRQ92834 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.96■□□□□ 0.63
RPGRQ92834 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RPGRQ92834 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.96■□□□□ 0.63
RPGRQ92834 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 RN7SL769P-201ENST00000469386 295 ntBASIC18.96■□□□□ 0.63
RPGRQ92834 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.96■□□□□ 0.63
RPGRQ92834 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.96■□□□□ 0.63
RPGRQ92834 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.96■□□□□ 0.63
RPGRQ92834 AP001002.3-201ENST00000623482 206 ntBASIC18.96■□□□□ 0.63
RPGRQ92834 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPGRQ92834 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.96■□□□□ 0.63
RPGRQ92834 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RPGRQ92834 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.96■□□□□ 0.63
RPGRQ92834 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms