Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RN7SL837P-201ENST00000463010 287 ntBASIC14.76□□□□□ -0.05
TM9SF4Q92544 POU5F1P6-201ENST00000466990 990 ntBASIC14.76□□□□□ -0.05
TM9SF4Q92544 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC015936.2-201ENST00000593177 259 ntBASIC14.76□□□□□ -0.05
TM9SF4Q92544 TMEM261P1-201ENST00000604899 340 ntBASIC14.76□□□□□ -0.05
TM9SF4Q92544 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.76□□□□□ -0.05
TM9SF4Q92544 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.76□□□□□ -0.05
TM9SF4Q92544 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TM9SF4Q92544 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.75□□□□□ -0.05
TM9SF4Q92544 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 BOLA2P3-201ENST00000404566 256 ntBASIC14.75□□□□□ -0.05
TM9SF4Q92544 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 RARRES2P5-201ENST00000564013 466 ntBASIC14.75□□□□□ -0.05
TM9SF4Q92544 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.75□□□□□ -0.05
TM9SF4Q92544 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TM9SF4Q92544 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 CYP4F24P-201ENST00000586049 1580 ntBASIC14.74□□□□□ -0.05
TM9SF4Q92544 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TM9SF4Q92544 KRT43P-201ENST00000434019 910 ntBASIC14.74□□□□□ -0.05
TM9SF4Q92544 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 ELK1P1-201ENST00000485699 580 ntBASIC14.74□□□□□ -0.05
TM9SF4Q92544 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC025048.3-201ENST00000590609 569 ntBASIC14.74□□□□□ -0.05
TM9SF4Q92544 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms