Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 AC234783.1-201ENST00000441761 496 ntBASIC15.55■□□□□ 0.08
CHD5Q8TDI0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.55■□□□□ 0.08
CHD5Q8TDI0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 AC017083.2-201ENST00000608069 979 ntBASIC15.55■□□□□ 0.08
CHD5Q8TDI0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.55■□□□□ 0.08
CHD5Q8TDI0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 ACKR1-201ENST00000368121 1240 ntBASIC15.54■□□□□ 0.08
CHD5Q8TDI0 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 KRT17P8-201ENST00000540749 863 ntBASIC15.54■□□□□ 0.08
CHD5Q8TDI0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHD5Q8TDI0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 CNN2P10-201ENST00000443067 918 ntBASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AP001889.1-201ENST00000525414 633 ntBASIC15.53■□□□□ 0.08
CHD5Q8TDI0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.53■□□□□ 0.08
CHD5Q8TDI0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms