Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 AC093726.1-201ENST00000608064 963 ntBASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 IGHV3-72-202ENST00000621503 303 ntBASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDND2Q8NHS1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 AL512384.1-201ENST00000406683 331 ntBASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 AC068587.6-202ENST00000641839 5619 ntBASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
CLDND2Q8NHS1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 U91328.1-201ENST00000437528 223 ntBASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 EEF1DP4-201ENST00000446006 880 ntBASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 ELK1P1-201ENST00000485699 580 ntBASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.28□□□□□ -0.28
CLDND2Q8NHS1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms