Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 AC022447.5-201ENST00000504817 392 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 MIR3188-201ENST00000583494 85 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 MSANTD2P1-201ENST00000445341 1368 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 GNG10P1-201ENST00000452289 199 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 BMF-206ENST00000558774 671 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 HERC2P11-201ENST00000562845 725 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC091304.3-201ENST00000566500 716 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AL118522.1-201ENST00000611368 560 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC098818.2-201ENST00000564925 2320 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 DPY19L2P5-201ENST00000456300 331 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC006529.1-201ENST00000459978 637 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 AL050341.2-201ENST00000567508 1541 ntBASIC8.35□□□□□ -1.07
HMCN2Q8NDA2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 AC067852.2-201ENST00000590513 2313 ntBASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 OR5BD1P-201ENST00000532527 817 ntBASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 BICD1-207ENST00000551848 1962 ntBASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 URB1-AS1-201ENST00000534991 831 ntBASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
HMCN2Q8NDA2 PP12613-201ENST00000424958 2230 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms