Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CALY-203ENST00000368558 825 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 MIR661-201ENST00000384842 89 ntBASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CRB3P1-201ENST00000449338 276 ntBASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 RRP7BP-205ENST00000566851 833 ntBASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 AC112504.1-201ENST00000623415 1841 ntBASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
LINC00304Q8N9R0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 AC138969.3-201ENST00000546612 1459 ntBASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 AC138932.2-201ENST00000548268 1459 ntBASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 AC126755.4-201ENST00000549796 1459 ntBASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SLC7A15P-201ENST00000424028 1363 ntBASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 PRAL-201ENST00000624952 3286 ntBASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
LINC00304Q8N9R0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms