Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 AL390754.1-201ENST00000619088 582 ntBASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCDC116Q8IYX3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 TSSK5P-201ENST00000423978 907 ntBASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCDC116Q8IYX3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 PCDHA3-202ENST00000532566 4594 ntBASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC116Q8IYX3 AC015922.1-201ENST00000421102 1152 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms