Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AC022532.1-201ENST00000624563 1728 ntBASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCUBE3Q8IX30 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 AC055876.2-201ENST00000531834 546 ntBASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 RRP7BP-205ENST00000566851 833 ntBASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 AC036164.1-201ENST00000570544 333 ntBASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 AL391825.1-201ENST00000457671 1364 ntBASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 TSPY26P-202ENST00000565928 3884 ntBASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SCUBE3Q8IX30 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 CICP11-201ENST00000434745 2827 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AC098850.1-201ENST00000419919 790 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AP005018.1-201ENST00000525475 301 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AC025181.2-201ENST00000606994 802 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 AC099568.2-201ENST00000609194 695 ntBASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SCUBE3Q8IX30 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms