Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 RN7SKP175-201ENST00000408472 289 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 KLF2P1-201ENST00000447438 1042 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 PIN4P1-201ENST00000451079 396 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 IGHV3-37-201ENST00000518544 340 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 DUX4L47-201ENST00000566374 394 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 AC026803.1-201ENST00000569130 274 ntBASIC19.17■□□□□ 0.66
COL23A1Q86Y22 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COL23A1Q86Y22 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 PRORSD1P-202ENST00000563365 2154 ntBASIC19.16■□□□□ 0.66
COL23A1Q86Y22 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 AP000356.3-201ENST00000382243 753 ntBASIC19.16■□□□□ 0.66
COL23A1Q86Y22 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 RN7SL67P-201ENST00000492147 296 ntBASIC19.16■□□□□ 0.66
COL23A1Q86Y22 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 AC002472.3-201ENST00000640124 621 ntBASIC19.16■□□□□ 0.66
COL23A1Q86Y22 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 CAP2P1-201ENST00000557743 1390 ntBASIC19.16■□□□□ 0.66
COL23A1Q86Y22 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL23A1Q86Y22 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 HLA-K-203ENST00000430151 1046 ntBASIC19.15■□□□□ 0.66
COL23A1Q86Y22 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 POU5F1P2-201ENST00000521750 823 ntBASIC19.15■□□□□ 0.66
COL23A1Q86Y22 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL23A1Q86Y22 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms