Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 YBX2P1-201ENST00000394192 760 ntBASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 MCCD1P2-201ENST00000423228 335 ntBASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 UXT-AS1-201ENST00000590504 1525 ntBASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 AC067750.1-201ENST00000608826 6545 ntBASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 CICP23-201ENST00000605013 2741 ntBASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMARCD3Q6STE5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 AC026748.1-201ENST00000624349 3251 ntBASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMARCD3Q6STE5 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 HNRNPUP1-201ENST00000554987 333 ntBASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 AC097359.3-201ENST00000603982 1210 ntBASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 AC084121.4-201ENST00000641598 221 ntBASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 AF228730.8-201ENST00000642140 221 ntBASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.27□□□□□ -0.13
SMARCD3Q6STE5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 AC023024.2-201ENST00000623561 1993 ntBASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMARCD3Q6STE5 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms