Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 LINC00552-201ENST00000625151 2579 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MCCD1P2-201ENST00000423228 335 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC007967.2-201ENST00000432613 625 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC004967.1-201ENST00000453589 447 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 RPS15P9-201ENST00000494093 319 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 IGHV3-65-201ENST00000523210 341 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf88Q6PI97 AC015656.1-201ENST00000624209 3578 ntBASIC13.7□□□□□ -0.22
C11orf88Q6PI97 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 AL590787.1-201ENST00000568856 1315 ntBASIC13.69□□□□□ -0.22
C11orf88Q6PI97 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 MRPL20P1-201ENST00000400819 433 ntBASIC13.69□□□□□ -0.22
C11orf88Q6PI97 VN2R19P-201ENST00000442399 1052 ntBASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 MIR4751-201ENST00000578027 74 ntBASIC13.69□□□□□ -0.22
C11orf88Q6PI97 AC010327.4-202ENST00000591484 748 ntBASIC13.69□□□□□ -0.22
C11orf88Q6PI97 AC010654.1-201ENST00000615722 808 ntBASIC13.69□□□□□ -0.22
C11orf88Q6PI97 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf88Q6PI97 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms