Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC62Q6P9F0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 AC006001.1-201ENST00000325130 474 ntBASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 DUX4L45-201ENST00000566406 1057 ntBASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 BX539320.1-201ENST00000623759 877 ntBASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC62Q6P9F0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AC068587.6-202ENST00000641839 5619 ntBASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 YBX1P6-201ENST00000442962 1002 ntBASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AL391005.1-201ENST00000623953 2435 ntBASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC62Q6P9F0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 AL603832.2-201ENST00000566195 2125 ntBASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC62Q6P9F0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms