Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 MIR5189-201ENST00000577370 114 ntBASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 AC233724.13-201ENST00000598383 410 ntBASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 AC093813.1-201ENST00000605066 256 ntBASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.42□□□□□ -0.1
H3F3CQ6NXT2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 BOLA2P3-201ENST00000404566 256 ntBASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 GAPDHP40-201ENST00000505218 1006 ntBASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 MIR6805-201ENST00000615055 62 ntBASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H3F3CQ6NXT2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AC024909.3-201ENST00000611513 2257 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 ACKR1-201ENST00000368121 1240 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AC022210.1-201ENST00000449856 793 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AL603832.2-201ENST00000566195 2125 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AC009486.1-201ENST00000569860 813 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 CLUHP6-201ENST00000580789 941 ntBASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.4□□□□□ -0.1
H3F3CQ6NXT2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms