Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 RPL7P3-201ENST00000441388 714 ntBASIC18.66■□□□□ 0.58
RFX7Q2KHR2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 AC022137.2-201ENST00000503482 481 ntBASIC18.66■□□□□ 0.58
RFX7Q2KHR2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFX7Q2KHR2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 WASH3P-207ENST00000560956 1394 ntBASIC18.65■□□□□ 0.58
RFX7Q2KHR2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 KLF2P4-201ENST00000451959 1225 ntBASIC18.65■□□□□ 0.58
RFX7Q2KHR2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 FO681548.1-201ENST00000455617 1132 ntBASIC18.65■□□□□ 0.58
RFX7Q2KHR2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 FTH1P14-201ENST00000482930 551 ntBASIC18.65■□□□□ 0.58
RFX7Q2KHR2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 AP001063.1-201ENST00000568332 529 ntBASIC18.65■□□□□ 0.58
RFX7Q2KHR2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.65■□□□□ 0.58
RFX7Q2KHR2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.64■□□□□ 0.58
RFX7Q2KHR2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 FAM86MP-201ENST00000340703 885 ntBASIC18.64■□□□□ 0.57
RFX7Q2KHR2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 BAATP1-201ENST00000412284 1225 ntBASIC18.64■□□□□ 0.57
RFX7Q2KHR2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AC009486.1-201ENST00000569860 813 ntBASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX7Q2KHR2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms