Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 AP000356.3-201ENST00000382243 753 ntBASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 REXO1L1P-202ENST00000608646 1974 ntBASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RSPO4Q2I0M5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 LRRC59-203ENST00000576448 1531 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AC245100.5-201ENST00000452108 331 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 C2orf69P1-201ENST00000563532 1093 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 MIR4754-201ENST00000582477 89 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AL450472.2-201ENST00000603663 1156 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AL136295.7-201ENST00000619226 1200 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AL132780.4-201ENST00000624870 1135 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 AL645728.1-201ENST00000366221 2101 ntBASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RSPO4Q2I0M5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.92□□□□□ -0.02
RSPO4Q2I0M5 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms