Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.97□□□□□ -0.17
SCN1BQ07699 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 CRYGEP-201ENST00000412192 528 ntBASIC13.97□□□□□ -0.17
SCN1BQ07699 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.97□□□□□ -0.17
SCN1BQ07699 AC098831.1-202ENST00000438821 336 ntBASIC13.97□□□□□ -0.17
SCN1BQ07699 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.97□□□□□ -0.17
SCN1BQ07699 CXCL1P1-201ENST00000502804 216 ntBASIC13.97□□□□□ -0.17
SCN1BQ07699 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 OR7E47P-204ENST00000575924 449 ntBASIC13.97□□□□□ -0.17
SCN1BQ07699 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.97□□□□□ -0.17
SCN1BQ07699 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.97□□□□□ -0.17
SCN1BQ07699 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.97□□□□□ -0.17
SCN1BQ07699 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.97□□□□□ -0.17
SCN1BQ07699 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SCN1BQ07699 AC027601.5-201ENST00000624065 2482 ntBASIC13.97□□□□□ -0.17
SCN1BQ07699 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.97□□□□□ -0.17
SCN1BQ07699 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
SCN1BQ07699 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.96□□□□□ -0.17
SCN1BQ07699 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 HSPA7-201ENST00000445535 1927 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 MBLAC2-202ENST00000514906 1936 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
SCN1BQ07699 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 FAM185BP-201ENST00000443595 716 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
SCN1BQ07699 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.96□□□□□ -0.17
SCN1BQ07699 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.96□□□□□ -0.17
SCN1BQ07699 AP002469.2-201ENST00000531724 424 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 AL160237.2-201ENST00000556165 472 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 AC116407.3-201ENST00000623905 1129 ntBASIC13.96□□□□□ -0.17
SCN1BQ07699 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SCN1BQ07699 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCN1BQ07699 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.96□□□□□ -0.17
SCN1BQ07699 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.96□□□□□ -0.18
SCN1BQ07699 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCN1BQ07699 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCN1BQ07699 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCN1BQ07699 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCN1BQ07699 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCN1BQ07699 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.96□□□□□ -0.18
SCN1BQ07699 BX640514.1-201ENST00000583223 1918 ntBASIC13.96□□□□□ -0.18
SCN1BQ07699 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms