Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SCN7AQ01118 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 AL157791.1-201ENST00000553667 1699 ntBASIC18.9■□□□□ 0.62
SCN7AQ01118 AC006058.4-201ENST00000624016 1670 ntBASIC18.9■□□□□ 0.62
SCN7AQ01118 RN7SKP214-201ENST00000364208 315 ntBASIC18.9■□□□□ 0.62
SCN7AQ01118 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN7AQ01118 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SCN7AQ01118 AC100827.2-201ENST00000563214 1194 ntBASIC18.9■□□□□ 0.62
SCN7AQ01118 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN7AQ01118 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN7AQ01118 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SCN7AQ01118 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN7AQ01118 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN7AQ01118 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN7AQ01118 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SCN7AQ01118 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.89■□□□□ 0.62
SCN7AQ01118 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN7AQ01118 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.89■□□□□ 0.62
SCN7AQ01118 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SCN7AQ01118 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN7AQ01118 AC019193.1-201ENST00000506678 823 ntBASIC18.89■□□□□ 0.61
SCN7AQ01118 ALG3P1-201ENST00000508806 1114 ntBASIC18.89■□□□□ 0.61
SCN7AQ01118 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN7AQ01118 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.89■□□□□ 0.61
SCN7AQ01118 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN7AQ01118 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SCN7AQ01118 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 PCDH8P1-201ENST00000428983 2773 ntBASIC18.89■□□□□ 0.61
SCN7AQ01118 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN7AQ01118 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN7AQ01118 AC078875.1-201ENST00000431907 724 ntBASIC18.89■□□□□ 0.61
SCN7AQ01118 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN7AQ01118 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN7AQ01118 RTN3P1-201ENST00000536295 711 ntBASIC18.89■□□□□ 0.61
SCN7AQ01118 NPM1P43-201ENST00000558669 786 ntBASIC18.89■□□□□ 0.61
SCN7AQ01118 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.89■□□□□ 0.61
SCN7AQ01118 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
SCN7AQ01118 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 AL360270.3-201ENST00000609118 1348 ntBASIC18.88■□□□□ 0.61
SCN7AQ01118 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN7AQ01118 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 AL118508.1-201ENST00000613502 2345 ntBASIC18.88■□□□□ 0.61
SCN7AQ01118 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SCN7AQ01118 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SCN7AQ01118 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN7AQ01118 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN7AQ01118 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.88■□□□□ 0.61
SCN7AQ01118 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.88■□□□□ 0.61
SCN7AQ01118 RPL18P13-201ENST00000478088 569 ntBASIC18.88■□□□□ 0.61
SCN7AQ01118 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 DUX4L46-201ENST00000566845 751 ntBASIC18.88■□□□□ 0.61
SCN7AQ01118 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC18.88■□□□□ 0.61
SCN7AQ01118 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN7AQ01118 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCN7AQ01118 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN7AQ01118 AC105250.1-201ENST00000509378 2057 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms