Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
CKS1BP61024 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 LINC01101-201ENST00000622953 1884 ntBASIC11.04□□□□□ -0.64
CKS1BP61024 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.04□□□□□ -0.64
CKS1BP61024 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
CKS1BP61024 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
CKS1BP61024 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.04□□□□□ -0.64
CKS1BP61024 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.03□□□□□ -0.64
CKS1BP61024 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
CKS1BP61024 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.03□□□□□ -0.64
CKS1BP61024 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 AP002383.4-201ENST00000442518 975 ntBASIC11.03□□□□□ -0.64
CKS1BP61024 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 AC139887.3-201ENST00000568585 713 ntBASIC11.03□□□□□ -0.64
CKS1BP61024 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.03□□□□□ -0.64
CKS1BP61024 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.03□□□□□ -0.64
CKS1BP61024 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.03□□□□□ -0.64
CKS1BP61024 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 REXO1L1P-201ENST00000379010 6598 ntBASIC11.03□□□□□ -0.64
CKS1BP61024 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.03□□□□□ -0.64
CKS1BP61024 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CKS1BP61024 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CKS1BP61024 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.02□□□□□ -0.64
CKS1BP61024 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
CKS1BP61024 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.02□□□□□ -0.64
CKS1BP61024 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.02□□□□□ -0.64
CKS1BP61024 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.02□□□□□ -0.64
CKS1BP61024 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CKS1BP61024 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.02□□□□□ -0.64
CKS1BP61024 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CKS1BP61024 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CKS1BP61024 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.02□□□□□ -0.65
CKS1BP61024 AP005117.1-202ENST00000581724 1908 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms