Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
AP3S2P59780 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
AP3S2P59780 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.43□□□□□ -0.26
AP3S2P59780 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.43□□□□□ -0.26
AP3S2P59780 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.43□□□□□ -0.26
AP3S2P59780 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.43□□□□□ -0.26
AP3S2P59780 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.43□□□□□ -0.26
AP3S2P59780 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.43□□□□□ -0.26
AP3S2P59780 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
AP3S2P59780 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.42□□□□□ -0.26
AP3S2P59780 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.42□□□□□ -0.26
AP3S2P59780 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
AP3S2P59780 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
AP3S2P59780 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
AP3S2P59780 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
AP3S2P59780 NUS1P2-201ENST00000417358 873 ntBASIC13.42□□□□□ -0.26
AP3S2P59780 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 GPX1P2-201ENST00000429271 606 ntBASIC13.42□□□□□ -0.26
AP3S2P59780 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
AP3S2P59780 AC006557.2-201ENST00000592985 1240 ntBASIC13.42□□□□□ -0.26
AP3S2P59780 AC011467.4-201ENST00000594891 528 ntBASIC13.42□□□□□ -0.26
AP3S2P59780 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.42□□□□□ -0.26
AP3S2P59780 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 AC018892.3-201ENST00000623986 2499 ntBASIC13.42□□□□□ -0.26
AP3S2P59780 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
AP3S2P59780 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.42□□□□□ -0.26
AP3S2P59780 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
AP3S2P59780 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
AP3S2P59780 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
AP3S2P59780 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.41□□□□□ -0.26
AP3S2P59780 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.41□□□□□ -0.26
AP3S2P59780 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms