Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 AC112504.1-201ENST00000623415 1841 ntBASIC11.4□□□□□ -0.58
APOC4P55056 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 KRT18P25-201ENST00000508931 1278 ntBASIC11.4□□□□□ -0.58
APOC4P55056 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 AC233724.13-201ENST00000598383 410 ntBASIC11.4□□□□□ -0.58
APOC4P55056 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 MIR6805-201ENST00000615055 62 ntBASIC11.4□□□□□ -0.58
APOC4P55056 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.4□□□□□ -0.58
APOC4P55056 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC11.4□□□□□ -0.58
APOC4P55056 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.4□□□□□ -0.58
APOC4P55056 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 AC092053.3-201ENST00000641308 4975 ntBASIC11.4□□□□□ -0.58
APOC4P55056 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.4□□□□□ -0.58
APOC4P55056 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
APOC4P55056 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOC4P55056 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
APOC4P55056 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.4□□□□□ -0.59
APOC4P55056 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
APOC4P55056 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.4□□□□□ -0.59
APOC4P55056 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.4□□□□□ -0.59
APOC4P55056 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
APOC4P55056 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
APOC4P55056 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.59
APOC4P55056 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
APOC4P55056 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
APOC4P55056 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
APOC4P55056 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
APOC4P55056 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.39□□□□□ -0.59
APOC4P55056 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.39□□□□□ -0.59
APOC4P55056 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.39□□□□□ -0.59
APOC4P55056 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.39□□□□□ -0.59
APOC4P55056 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
APOC4P55056 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.39□□□□□ -0.59
APOC4P55056 AC026410.3-201ENST00000514280 936 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms