Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.13■□□□□ 0.33
LBX1P52954 AL512324.3-201ENST00000619383 882 ntBASIC17.13■□□□□ 0.33
LBX1P52954 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LBX1P52954 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.13■□□□□ 0.33
LBX1P52954 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.13■□□□□ 0.33
LBX1P52954 AC067852.2-201ENST00000590513 2313 ntBASIC17.13■□□□□ 0.33
LBX1P52954 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LBX1P52954 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LBX1P52954 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LBX1P52954 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 PTGER4P2-201ENST00000328411 252 ntBASIC17.12■□□□□ 0.33
LBX1P52954 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LBX1P52954 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC17.12■□□□□ 0.33
LBX1P52954 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.12■□□□□ 0.33
LBX1P52954 PTGER4P3-201ENST00000458150 252 ntBASIC17.12■□□□□ 0.33
LBX1P52954 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
LBX1P52954 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 HERC2P11-201ENST00000562845 725 ntBASIC17.12■□□□□ 0.33
LBX1P52954 AC100756.2-201ENST00000569537 736 ntBASIC17.12■□□□□ 0.33
LBX1P52954 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 AC002044.2-201ENST00000624910 970 ntBASIC17.12■□□□□ 0.33
LBX1P52954 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 CTBP2P8-201ENST00000422584 1330 ntBASIC17.12■□□□□ 0.33
LBX1P52954 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LBX1P52954 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LBX1P52954 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.12■□□□□ 0.33
LBX1P52954 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LBX1P52954 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LBX1P52954 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 MIR1301-201ENST00000408518 82 ntBASIC17.11■□□□□ 0.33
LBX1P52954 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 AC114947.1-202ENST00000514136 344 ntBASIC17.11■□□□□ 0.33
LBX1P52954 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.11■□□□□ 0.33
LBX1P52954 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC17.11■□□□□ 0.33
LBX1P52954 AC254633.1-201ENST00000606790 345 ntBASIC17.11■□□□□ 0.33
LBX1P52954 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 MIR6746-201ENST00000620971 63 ntBASIC17.11■□□□□ 0.33
LBX1P52954 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LBX1P52954 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.11■□□□□ 0.33
LBX1P52954 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LBX1P52954 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LBX1P52954 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.1■□□□□ 0.33
LBX1P52954 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LBX1P52954 INE2-201ENST00000630399 1874 ntBASIC17.1■□□□□ 0.33
LBX1P52954 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms