Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.67□□□□□ -0.06
SMSP52788 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.67□□□□□ -0.06
SMSP52788 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.67□□□□□ -0.06
SMSP52788 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 MTND6P24-201ENST00000440466 518 ntBASIC14.67□□□□□ -0.06
SMSP52788 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 TP53TG3HP-202ENST00000569755 579 ntBASIC14.67□□□□□ -0.06
SMSP52788 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
SMSP52788 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 AL589739.1-201ENST00000607720 493 ntBASIC14.67□□□□□ -0.06
SMSP52788 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 AC007541.1-201ENST00000570282 1469 ntBASIC14.67□□□□□ -0.06
SMSP52788 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.67□□□□□ -0.06
SMSP52788 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
SMSP52788 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.67□□□□□ -0.06
SMSP52788 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
SMSP52788 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SMSP52788 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 FAM45BP-202ENST00000592932 1624 ntBASIC14.66□□□□□ -0.06
SMSP52788 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.66□□□□□ -0.06
SMSP52788 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 MYO15B-237ENST00000642007 4893 ntBASIC14.66□□□□□ -0.06
SMSP52788 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SMSP52788 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SMSP52788 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.66□□□□□ -0.06
SMSP52788 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.66□□□□□ -0.06
SMSP52788 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.66□□□□□ -0.06
SMSP52788 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 MEIS3P1-201ENST00000495167 958 ntBASIC14.66□□□□□ -0.06
SMSP52788 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.66□□□□□ -0.06
SMSP52788 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.66□□□□□ -0.06
SMSP52788 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.66□□□□□ -0.06
SMSP52788 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.66□□□□□ -0.06
SMSP52788 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 AC140912.1-201ENST00000577171 1054 ntBASIC14.66□□□□□ -0.06
SMSP52788 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.66□□□□□ -0.06
SMSP52788 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.66□□□□□ -0.06
SMSP52788 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.66□□□□□ -0.06
SMSP52788 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SMSP52788 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.66□□□□□ -0.06
SMSP52788 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SMSP52788 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SMSP52788 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMSP52788 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SMSP52788 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMSP52788 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMSP52788 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SMSP52788 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SMSP52788 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms