Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AC107890.1-201ENST00000422478 521 ntBASIC15.17■□□□□ 0.02
CLCN2P51788 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.17■□□□□ 0.02
CLCN2P51788 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.17■□□□□ 0.02
CLCN2P51788 AC051619.7-201ENST00000568314 623 ntBASIC15.17■□□□□ 0.02
CLCN2P51788 MIR4453-201ENST00000584019 89 ntBASIC15.17■□□□□ 0.02
CLCN2P51788 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.17■□□□□ 0.02
CLCN2P51788 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CLCN2P51788 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CLCN2P51788 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCN2P51788 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CLCN2P51788 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCN2P51788 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CLCN2P51788 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCN2P51788 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCN2P51788 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCN2P51788 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CLCN2P51788 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 HAUS4P1-201ENST00000406739 1145 ntBASIC15.16■□□□□ 0.02
CLCN2P51788 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCN2P51788 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCN2P51788 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCN2P51788 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCN2P51788 AC140878.1-201ENST00000565277 250 ntBASIC15.16■□□□□ 0.02
CLCN2P51788 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 AL365330.1-201ENST00000607459 531 ntBASIC15.16■□□□□ 0.02
CLCN2P51788 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCN2P51788 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CLCN2P51788 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CLCN2P51788 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCN2P51788 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLCN2P51788 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLCN2P51788 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.15■□□□□ 0.02
CLCN2P51788 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CLCN2P51788 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLCN2P51788 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.15■□□□□ 0.02
CLCN2P51788 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.15■□□□□ 0.02
CLCN2P51788 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 AC245100.5-201ENST00000452108 331 ntBASIC15.15■□□□□ 0.02
CLCN2P51788 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLCN2P51788 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.15■□□□□ 0.02
CLCN2P51788 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms