Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.96■□□□□ 0.31
CASP4P49662 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.96■□□□□ 0.31
CASP4P49662 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.96■□□□□ 0.31
CASP4P49662 AC011467.4-201ENST00000594891 528 ntBASIC16.96■□□□□ 0.31
CASP4P49662 AC000095.1-201ENST00000603208 874 ntBASIC16.96■□□□□ 0.31
CASP4P49662 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.96■□□□□ 0.31
CASP4P49662 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CASP4P49662 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CASP4P49662 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 AGAP7P-201ENST00000582299 2062 ntBASIC16.96■□□□□ 0.31
CASP4P49662 AGAP14-201ENST00000624701 2060 ntBASIC16.96■□□□□ 0.31
CASP4P49662 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CASP4P49662 LINC00528-201ENST00000600723 2160 ntBASIC16.96■□□□□ 0.31
CASP4P49662 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.96■□□□□ 0.31
CASP4P49662 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CASP4P49662 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASP4P49662 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CASP4P49662 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CASP4P49662 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CASP4P49662 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CASP4P49662 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CASP4P49662 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.96■□□□□ 0.3
CASP4P49662 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CASP4P49662 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
CASP4P49662 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CASP4P49662 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CASP4P49662 AC023824.1-201ENST00000562945 2975 ntBASIC16.95■□□□□ 0.3
CASP4P49662 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CASP4P49662 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CASP4P49662 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 SPTLC1P1-201ENST00000447199 261 ntBASIC16.95■□□□□ 0.3
CASP4P49662 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.95■□□□□ 0.3
CASP4P49662 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.95■□□□□ 0.3
CASP4P49662 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.95■□□□□ 0.3
CASP4P49662 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.95■□□□□ 0.3
CASP4P49662 RN7SL204P-201ENST00000582831 262 ntBASIC16.95■□□□□ 0.3
CASP4P49662 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.95■□□□□ 0.3
CASP4P49662 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.95■□□□□ 0.3
CASP4P49662 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
CASP4P49662 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.95■□□□□ 0.3
CASP4P49662 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CASP4P49662 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.95■□□□□ 0.3
CASP4P49662 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.95■□□□□ 0.3
CASP4P49662 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CASP4P49662 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.94■□□□□ 0.3
CASP4P49662 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CASP4P49662 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.94■□□□□ 0.3
CASP4P49662 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CASP4P49662 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.94■□□□□ 0.3
CASP4P49662 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.94■□□□□ 0.3
CASP4P49662 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 AC236430.1-201ENST00000402231 743 ntBASIC16.94■□□□□ 0.3
CASP4P49662 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.94■□□□□ 0.3
CASP4P49662 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.94■□□□□ 0.3
CASP4P49662 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CASP4P49662 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.94■□□□□ 0.3
CASP4P49662 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.94■□□□□ 0.3
CASP4P49662 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms