Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TM4SF4P48230 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.34■□□□□ 0.37
TM4SF4P48230 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.34■□□□□ 0.37
TM4SF4P48230 NDUFS6P1-201ENST00000485187 316 ntBASIC17.34■□□□□ 0.37
TM4SF4P48230 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TM4SF4P48230 AP003398.1-201ENST00000531124 318 ntBASIC17.34■□□□□ 0.37
TM4SF4P48230 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TM4SF4P48230 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TM4SF4P48230 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.34■□□□□ 0.37
TM4SF4P48230 AC005962.1-201ENST00000584100 773 ntBASIC17.34■□□□□ 0.37
TM4SF4P48230 SIGLEC18P-201ENST00000602271 909 ntBASIC17.34■□□□□ 0.37
TM4SF4P48230 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.34■□□□□ 0.37
TM4SF4P48230 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 AC105137.3-201ENST00000617588 984 ntBASIC17.34■□□□□ 0.37
TM4SF4P48230 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 AC148477.9-201ENST00000623974 539 ntBASIC17.34■□□□□ 0.37
TM4SF4P48230 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TM4SF4P48230 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TM4SF4P48230 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TM4SF4P48230 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
TM4SF4P48230 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF4P48230 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF4P48230 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.33■□□□□ 0.37
TM4SF4P48230 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF4P48230 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TM4SF4P48230 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.33■□□□□ 0.37
TM4SF4P48230 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF4P48230 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
TM4SF4P48230 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF4P48230 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TM4SF4P48230 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.33■□□□□ 0.37
TM4SF4P48230 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 FRMPD2B-201ENST00000431305 1347 ntBASIC17.33■□□□□ 0.36
TM4SF4P48230 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TM4SF4P48230 Z69890.1-201ENST00000382990 339 ntBASIC17.33■□□□□ 0.36
TM4SF4P48230 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TM4SF4P48230 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.33■□□□□ 0.36
TM4SF4P48230 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.33■□□□□ 0.36
TM4SF4P48230 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 AP000358.1-201ENST00000456260 156 ntBASIC17.33■□□□□ 0.36
TM4SF4P48230 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.33■□□□□ 0.36
TM4SF4P48230 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.33■□□□□ 0.36
TM4SF4P48230 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.33■□□□□ 0.36
TM4SF4P48230 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TM4SF4P48230 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.33■□□□□ 0.36
TM4SF4P48230 AL157813.1-201ENST00000612996 587 ntBASIC17.33■□□□□ 0.36
TM4SF4P48230 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TM4SF4P48230 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.33■□□□□ 0.36
TM4SF4P48230 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TM4SF4P48230 AC007613.1-201ENST00000572811 2597 ntBASIC17.32■□□□□ 0.36
TM4SF4P48230 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.32■□□□□ 0.36
TM4SF4P48230 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.32■□□□□ 0.36
TM4SF4P48230 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 DNM1P51-201ENST00000558149 522 ntBASIC17.32■□□□□ 0.36
TM4SF4P48230 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 AC087392.5-201ENST00000612517 489 ntBASIC17.32■□□□□ 0.36
TM4SF4P48230 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TM4SF4P48230 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.32■□□□□ 0.36
TM4SF4P48230 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
TM4SF4P48230 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.32■□□□□ 0.36
TM4SF4P48230 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 AC124067.4-201ENST00000519691 2379 ntBASIC17.32■□□□□ 0.36
TM4SF4P48230 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TM4SF4P48230 AC006058.4-201ENST00000624016 1670 ntBASIC17.32■□□□□ 0.36
TM4SF4P48230 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TM4SF4P48230 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TM4SF4P48230 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TM4SF4P48230 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms