Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.8□□□□□ -0.04
PRPH2P23942 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.8□□□□□ -0.04
PRPH2P23942 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.8□□□□□ -0.04
PRPH2P23942 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRPH2P23942 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.79□□□□□ -0.04
PRPH2P23942 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PRPH2P23942 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PRPH2P23942 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 KLF2P3-201ENST00000451977 1087 ntBASIC14.79□□□□□ -0.04
PRPH2P23942 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.79□□□□□ -0.04
PRPH2P23942 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 AC069120.2-201ENST00000524091 540 ntBASIC14.79□□□□□ -0.04
PRPH2P23942 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.79□□□□□ -0.04
PRPH2P23942 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.79□□□□□ -0.04
PRPH2P23942 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.79□□□□□ -0.04
PRPH2P23942 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.79□□□□□ -0.04
PRPH2P23942 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 AC092337.1-201ENST00000568699 1129 ntBASIC14.79□□□□□ -0.04
PRPH2P23942 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.79□□□□□ -0.04
PRPH2P23942 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.79□□□□□ -0.04
PRPH2P23942 AL844908.2-201ENST00000609461 460 ntBASIC14.79□□□□□ -0.04
PRPH2P23942 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
PRPH2P23942 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 AL109936.8-201ENST00000641772 604 ntBASIC14.79□□□□□ -0.04
PRPH2P23942 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.79□□□□□ -0.04
PRPH2P23942 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRPH2P23942 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PRPH2P23942 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.78□□□□□ -0.04
PRPH2P23942 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.78□□□□□ -0.04
PRPH2P23942 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PRPH2P23942 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
PRPH2P23942 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.78□□□□□ -0.04
PRPH2P23942 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.78□□□□□ -0.04
PRPH2P23942 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 AC125807.1-201ENST00000483097 614 ntBASIC14.78□□□□□ -0.04
PRPH2P23942 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 AC025678.2-201ENST00000562061 970 ntBASIC14.78□□□□□ -0.04
PRPH2P23942 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.78□□□□□ -0.04
PRPH2P23942 AL158211.3-201ENST00000607385 239 ntBASIC14.78□□□□□ -0.04
PRPH2P23942 AL596442.2-201ENST00000610240 980 ntBASIC14.78□□□□□ -0.04
PRPH2P23942 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.78□□□□□ -0.04
PRPH2P23942 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.78□□□□□ -0.04
PRPH2P23942 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.78□□□□□ -0.04
PRPH2P23942 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.78□□□□□ -0.04
PRPH2P23942 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRPH2P23942 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms