Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.73□□□□□ -0.21
ATF1P18846 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ATF1P18846 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ATF1P18846 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ATF1P18846 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ATF1P18846 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ATF1P18846 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 RN7SL589P-201ENST00000481268 310 ntBASIC13.72□□□□□ -0.21
ATF1P18846 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.72□□□□□ -0.21
ATF1P18846 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.72□□□□□ -0.21
ATF1P18846 AC120114.3-201ENST00000611923 658 ntBASIC13.72□□□□□ -0.21
ATF1P18846 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ATF1P18846 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.72□□□□□ -0.21
ATF1P18846 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATF1P18846 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.71□□□□□ -0.21
ATF1P18846 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ATF1P18846 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
ATF1P18846 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.71□□□□□ -0.21
ATF1P18846 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.71□□□□□ -0.21
ATF1P18846 AC006504.5-208ENST00000588784 2401 ntBASIC13.71□□□□□ -0.21
ATF1P18846 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.71□□□□□ -0.21
ATF1P18846 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.71□□□□□ -0.21
ATF1P18846 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.71□□□□□ -0.21
ATF1P18846 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATF1P18846 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.71□□□□□ -0.21
ATF1P18846 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms