Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CSB-PGBD3P0DP91 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 RN7SL11P-201ENST00000471305 293 ntBASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AC073413.1-201ENST00000603927 732 ntBASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AC091544.8-201ENST00000619490 361 ntBASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 KRT8P14-201ENST00000414254 1442 ntBASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.43■□□□□ 0.86
CSB-PGBD3P0DP91 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 Z97180.1-201ENST00000445173 988 ntBASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 AL391280.1-201ENST00000506969 1062 ntBASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 AP001002.3-201ENST00000623482 206 ntBASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.42■□□□□ 0.86
CSB-PGBD3P0DP91 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 AP003680.1-201ENST00000598970 3660 ntBASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 AL596087.1-201ENST00000400979 1969 ntBASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 EIF3FP3-201ENST00000434851 1086 ntBASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 HIST2H2BB-201ENST00000449108 381 ntBASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 U62317.3-201ENST00000608319 855 ntBASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 ZACNP1-201ENST00000612259 710 ntBASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CSB-PGBD3P0DP91 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms