Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 AL591163.1-201ENST00000641757 987 ntBASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCNYL3P0C7X3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 AC092384.3-202ENST00000564646 2873 ntBASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 MIR648-201ENST00000385046 94 ntBASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 ARSEP1-201ENST00000420443 635 ntBASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 AC017083.2-201ENST00000608069 979 ntBASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 IGHV3-72-202ENST00000621503 303 ntBASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.13■□□□□ 0.01
CCNYL3P0C7X3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 U91328.1-201ENST00000437528 223 ntBASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AC025048.3-201ENST00000590609 569 ntBASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AC004790.1-201ENST00000612686 536 ntBASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AL162274.1-201ENST00000617191 1098 ntBASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 AC005702.4-201ENST00000618393 416 ntBASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCNYL3P0C7X3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms