Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.27□□□□□ -0.12
HIST1H2ABP04908 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AC254562.1-201ENST00000417586 456 ntBASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AC093520.2-201ENST00000561830 333 ntBASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AC007967.4-201ENST00000614700 386 ntBASIC14.27□□□□□ -0.13
HIST1H2ABP04908 MIR6080-201ENST00000617359 66 ntBASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AC009093.7-201ENST00000623853 1223 ntBASIC14.27□□□□□ -0.13
HIST1H2ABP04908 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIST1H2ABP04908 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 AZGP1P1-201ENST00000411909 902 ntBASIC14.26□□□□□ -0.13
HIST1H2ABP04908 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 MIR4453-201ENST00000584019 89 ntBASIC14.26□□□□□ -0.13
HIST1H2ABP04908 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2ABP04908 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms