Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 BX842568.4-201ENST00000421222 227 ntBASIC14.08□□□□□ -0.16
HLA-DPB1P04440 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 AC092865.5-201ENST00000545435 363 ntBASIC14.08□□□□□ -0.16
HLA-DPB1P04440 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 C20orf181-201ENST00000623918 480 ntBASIC14.08□□□□□ -0.16
HLA-DPB1P04440 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 AC023024.2-201ENST00000623561 1993 ntBASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.08□□□□□ -0.16
HLA-DPB1P04440 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DPB1P04440 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 ZBED1P1-201ENST00000502364 1930 ntBASIC14.07□□□□□ -0.16
HLA-DPB1P04440 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 AL671277.1-201ENST00000429656 993 ntBASIC14.07□□□□□ -0.16
HLA-DPB1P04440 HTR5BP-201ENST00000430851 1154 ntBASIC14.07□□□□□ -0.16
HLA-DPB1P04440 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.07□□□□□ -0.16
HLA-DPB1P04440 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DPB1P04440 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DPB1P04440 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms