Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
P04436 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.21□□□□□ -0.14
P04436 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
P04436 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
P04436 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.21□□□□□ -0.14
P04436 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P04436 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
P04436 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
P04436 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
P04436 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
P04436 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.2□□□□□ -0.14
P04436 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.2□□□□□ -0.14
P04436 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 KRT43P-201ENST00000434019 910 ntBASIC14.2□□□□□ -0.14
P04436 U91328.1-201ENST00000437528 223 ntBASIC14.2□□□□□ -0.14
P04436 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.2□□□□□ -0.14
P04436 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
P04436 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.2□□□□□ -0.14
P04436 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.2□□□□□ -0.14
P04436 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 AC092127.1-201ENST00000567093 3455 ntBASIC14.2□□□□□ -0.14
P04436 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.2□□□□□ -0.14
P04436 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
P04436 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
P04436 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.2□□□□□ -0.14
P04436 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
P04436 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
P04436 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
P04436 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
P04436 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.19□□□□□ -0.14
P04436 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.19□□□□□ -0.14
P04436 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
P04436 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
P04436 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.19□□□□□ -0.14
P04436 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.19□□□□□ -0.14
P04436 AC234783.1-201ENST00000441761 496 ntBASIC14.19□□□□□ -0.14
P04436 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.19□□□□□ -0.14
P04436 KRT17P8-201ENST00000540749 863 ntBASIC14.19□□□□□ -0.14
P04436 RAB43P1-201ENST00000561790 589 ntBASIC14.19□□□□□ -0.14
P04436 AP001063.1-201ENST00000568332 529 ntBASIC14.19□□□□□ -0.14
P04436 AC106886.1-201ENST00000568660 600 ntBASIC14.19□□□□□ -0.14
P04436 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms