Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX2-2O95096 GAPDHP40-201ENST00000505218 1006 ntBASIC14.34□□□□□ -0.11
NKX2-2O95096 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX2-2O95096 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 RRP7BP-205ENST00000566851 833 ntBASIC14.34□□□□□ -0.11
NKX2-2O95096 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 AC009118.2-201ENST00000613275 655 ntBASIC14.34□□□□□ -0.11
NKX2-2O95096 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 AJ011932.1-201ENST00000621707 465 ntBASIC14.34□□□□□ -0.11
NKX2-2O95096 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX2-2O95096 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NKX2-2O95096 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NKX2-2O95096 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX2-2O95096 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
NKX2-2O95096 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.34□□□□□ -0.11
NKX2-2O95096 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-2O95096 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-2O95096 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-2O95096 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-2O95096 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.33□□□□□ -0.11
NKX2-2O95096 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-2O95096 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NKX2-2O95096 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX2-2O95096 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NKX2-2O95096 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX2-2O95096 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX2-2O95096 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 RN7SL399P-201ENST00000471648 279 ntBASIC14.33□□□□□ -0.12
NKX2-2O95096 FAM86LP-201ENST00000478302 853 ntBASIC14.33□□□□□ -0.12
NKX2-2O95096 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.33□□□□□ -0.12
NKX2-2O95096 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.33□□□□□ -0.12
NKX2-2O95096 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
NKX2-2O95096 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 AC011467.4-201ENST00000594891 528 ntBASIC14.33□□□□□ -0.12
NKX2-2O95096 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NKX2-2O95096 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX2-2O95096 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NKX2-2O95096 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX2-2O95096 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-2O95096 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms