Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LTN1O94822 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.13■□□□□ 0.81
LTN1O94822 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.12■□□□□ 0.81
LTN1O94822 AC020910.5-201ENST00000623668 1865 ntBASIC20.12■□□□□ 0.81
LTN1O94822 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.12■□□□□ 0.81
LTN1O94822 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 MPV17-204ENST00000399052 749 ntTSL 4 BASIC20.12■□□□□ 0.81
LTN1O94822 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC20.12■□□□□ 0.81
LTN1O94822 AL133466.1-201ENST00000447582 150 ntBASIC20.12■□□□□ 0.81
LTN1O94822 AC026434.2-201ENST00000506094 1078 ntBASIC20.12■□□□□ 0.81
LTN1O94822 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.12■□□□□ 0.81
LTN1O94822 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 AL136295.7-201ENST00000619226 1200 ntBASIC20.12■□□□□ 0.81
LTN1O94822 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LTN1O94822 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LTN1O94822 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.12■□□□□ 0.81
LTN1O94822 AL137783.1-201ENST00000623494 1896 ntBASIC20.11■□□□□ 0.81
LTN1O94822 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.11■□□□□ 0.81
LTN1O94822 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.11■□□□□ 0.81
LTN1O94822 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.11■□□□□ 0.81
LTN1O94822 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 MBLAC2-202ENST00000514906 1936 ntBASIC20.11■□□□□ 0.81
LTN1O94822 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LTN1O94822 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LTN1O94822 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LTN1O94822 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
LTN1O94822 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.11■□□□□ 0.81
LTN1O94822 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LTN1O94822 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LTN1O94822 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 AL008707.1-201ENST00000422498 534 ntBASIC20.11■□□□□ 0.81
LTN1O94822 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.11■□□□□ 0.81
LTN1O94822 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.11■□□□□ 0.81
LTN1O94822 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
LTN1O94822 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LTN1O94822 NAT9-224ENST00000583757 583 ntTSL 3 BASIC20.11■□□□□ 0.81
LTN1O94822 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC20.11■□□□□ 0.81
LTN1O94822 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.11■□□□□ 0.81
LTN1O94822 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LTN1O94822 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 AC006058.4-201ENST00000624016 1670 ntBASIC20.1■□□□□ 0.81
LTN1O94822 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 AL353637.1-201ENST00000451571 732 ntBASIC20.1■□□□□ 0.81
LTN1O94822 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC20.1■□□□□ 0.81
LTN1O94822 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.1■□□□□ 0.81
LTN1O94822 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
LTN1O94822 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LTN1O94822 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.1■□□□□ 0.81
LTN1O94822 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms