Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
PRICKLE3O43900 AC022532.1-201ENST00000624563 1728 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRICKLE3O43900 KRT8P22-201ENST00000562317 1415 ntBASIC14.92□□□□□ -0.02
PRICKLE3O43900 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 KRT8P44-201ENST00000441609 1350 ntBASIC14.91□□□□□ -0.02
PRICKLE3O43900 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AP006294.1-201ENST00000415407 339 ntBASIC14.91□□□□□ -0.02
PRICKLE3O43900 NME2P1-201ENST00000426182 414 ntBASIC14.91□□□□□ -0.02
PRICKLE3O43900 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 AL033527.5-201ENST00000641382 801 ntBASIC14.91□□□□□ -0.02
PRICKLE3O43900 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PRICKLE3O43900 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PRICKLE3O43900 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 PPT1-215ENST00000641471 2368 ntBASIC14.9□□□□□ -0.02
PRICKLE3O43900 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 C18orf15-201ENST00000623680 2534 ntBASIC14.9□□□□□ -0.02
PRICKLE3O43900 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 C1QBPP1-201ENST00000400117 770 ntBASIC14.9□□□□□ -0.02
PRICKLE3O43900 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 ENPP7P5-201ENST00000541031 1031 ntBASIC14.9□□□□□ -0.02
PRICKLE3O43900 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRICKLE3O43900 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 AL138799.1-201ENST00000448213 1675 ntBASIC14.9□□□□□ -0.02
PRICKLE3O43900 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRICKLE3O43900 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRICKLE3O43900 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.89□□□□□ -0.03
PRICKLE3O43900 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PRICKLE3O43900 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms