Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.87□□□□□ -0.19
SGCEO43556 Z92544.3-201ENST00000624747 417 ntBASIC13.87□□□□□ -0.19
SGCEO43556 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.87□□□□□ -0.19
SGCEO43556 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SGCEO43556 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.87□□□□□ -0.19
SGCEO43556 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.87□□□□□ -0.19
SGCEO43556 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SGCEO43556 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.87□□□□□ -0.19
SGCEO43556 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.87□□□□□ -0.19
SGCEO43556 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SGCEO43556 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SGCEO43556 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SGCEO43556 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SGCEO43556 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SGCEO43556 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SGCEO43556 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.86□□□□□ -0.19
SGCEO43556 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SGCEO43556 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SGCEO43556 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SGCEO43556 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.86□□□□□ -0.19
SGCEO43556 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.86□□□□□ -0.19
SGCEO43556 SERBP1P3-201ENST00000459980 809 ntBASIC13.86□□□□□ -0.19
SGCEO43556 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SGCEO43556 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SGCEO43556 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.86□□□□□ -0.19
SGCEO43556 AC105250.1-201ENST00000509378 2057 ntBASIC13.86□□□□□ -0.19
SGCEO43556 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SGCEO43556 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SGCEO43556 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SGCEO43556 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 AC136604.1-201ENST00000418535 575 ntBASIC13.85□□□□□ -0.19
SGCEO43556 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 AC125807.1-201ENST00000483097 614 ntBASIC13.85□□□□□ -0.19
SGCEO43556 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.85□□□□□ -0.19
SGCEO43556 AC097359.3-201ENST00000603982 1210 ntBASIC13.85□□□□□ -0.19
SGCEO43556 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SGCEO43556 MIR6069-201ENST00000620069 79 ntBASIC13.85□□□□□ -0.19
SGCEO43556 AC139530.3-201ENST00000620344 690 ntBASIC13.85□□□□□ -0.19
SGCEO43556 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.85□□□□□ -0.19
SGCEO43556 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SGCEO43556 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SGCEO43556 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms