Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
HDAC3O15379 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HDAC3O15379 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.19■□□□□ 0.02
HDAC3O15379 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
HDAC3O15379 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.19■□□□□ 0.02
HDAC3O15379 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.19■□□□□ 0.02
HDAC3O15379 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.19■□□□□ 0.02
HDAC3O15379 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.19■□□□□ 0.02
HDAC3O15379 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.19■□□□□ 0.02
HDAC3O15379 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.19■□□□□ 0.02
HDAC3O15379 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.19■□□□□ 0.02
HDAC3O15379 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HDAC3O15379 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.19■□□□□ 0.02
HDAC3O15379 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HDAC3O15379 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
HDAC3O15379 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HDAC3O15379 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HDAC3O15379 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 INTS4P1-203ENST00000641008 3683 ntBASIC15.18■□□□□ 0.02
HDAC3O15379 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.18■□□□□ 0.02
HDAC3O15379 GHSR-202ENST00000427970 912 ntBASIC15.18■□□□□ 0.02
HDAC3O15379 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.18■□□□□ 0.02
HDAC3O15379 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
HDAC3O15379 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
HDAC3O15379 SLC25A6P4-201ENST00000586535 553 ntBASIC15.18■□□□□ 0.02
HDAC3O15379 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.18■□□□□ 0.02
HDAC3O15379 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.18■□□□□ 0.02
HDAC3O15379 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
HDAC3O15379 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.18■□□□□ 0.02
HDAC3O15379 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.18■□□□□ 0.02
HDAC3O15379 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HDAC3O15379 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
HDAC3O15379 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HDAC3O15379 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.17■□□□□ 0.02
HDAC3O15379 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HDAC3O15379 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
HDAC3O15379 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HDAC3O15379 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms