Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 FAM86EP-206ENST00000510506 987 ntBASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AC133561.5-201ENST00000635547 218 ntBASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01546A6NGU7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC023794.5-201ENST00000564380 2157 ntBASIC10.96□□□□□ -0.65
LINC01546A6NGU7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AL596275.1-201ENST00000423464 877 ntBASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AC021087.4-201ENST00000563761 564 ntBASIC10.96□□□□□ -0.65
LINC01546A6NGU7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01546A6NGU7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01546A6NGU7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01546A6NGU7 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms