Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 SPTLC1P5-201ENST00000450718 252 ntBASIC19.18■□□□□ 0.66
LAMB4A4D0S4 RNMTL1P1-201ENST00000454103 560 ntBASIC19.18■□□□□ 0.66
LAMB4A4D0S4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 BNIP3P13-201ENST00000599968 566 ntBASIC19.18■□□□□ 0.66
LAMB4A4D0S4 AC068587.8-201ENST00000641239 219 ntBASIC19.18■□□□□ 0.66
LAMB4A4D0S4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LAMB4A4D0S4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LAMB4A4D0S4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 EIF4HP1-201ENST00000453115 687 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AC008132.1-202ENST00000342005 1389 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AL590440.2-201ENST00000641973 1595 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 SLC25A24P2-201ENST00000415059 510 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 RNA5SP423-201ENST00000517127 109 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 MIR3619-201ENST00000579667 83 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AC005324.6-201ENST00000587972 613 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 AL136301.1-201ENST00000615830 422 ntBASIC19.16■□□□□ 0.66
LAMB4A4D0S4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LAMB4A4D0S4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC19.15■□□□□ 0.66
LAMB4A4D0S4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms