Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 TIMM17BP1-201ENST00000545713 516 ntBASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 WASH4P-201ENST00000564273 1246 ntBASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTPDC1A2A3K4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AC006058.4-201ENST00000624016 1670 ntBASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTPDC1A2A3K4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 AP006294.1-201ENST00000415407 339 ntBASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 AC023824.1-201ENST00000562945 2975 ntBASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTPDC1A2A3K4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 AC098614.1-201ENST00000368528 745 ntBASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 MEP1AP4-201ENST00000423244 1087 ntBASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.3■□□□□ 0.52
PTPDC1A2A3K4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms