Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 UNC93B2-201ENST00000285383 730 ntBASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AL137784.2-201ENST00000607332 1000 ntBASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AP001350.2-201ENST00000625104 1094 ntBASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 PCDHA5-203ENST00000614258 4248 ntBASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 AL590787.1-201ENST00000568856 1315 ntBASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRAPPC1Q9Y5R8 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
TRAPPC1Q9Y5R8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 ARMC10P1-201ENST00000313754 855 ntBASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 RPPH1-201ENST00000516869 333 ntBASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AL109923.1-201ENST00000618799 583 ntBASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 AC015802.1-201ENST00000588104 1449 ntBASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TRAPPC1Q9Y5R8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms